CyanoType

Back Prochlorococcus marinus CCMP1375
Last update: 2015-12-31

Strain ID:

Prochlorococcus marinus CCMP1375

Strain Other ID:

 

Strain Co-ident:

SS120

Strain Category:

T, R, G

Strain Addiction:

 

Habitat Notes:

Marine, Open waters

Environment:

Aquatic, Saline

16S Acc Nbr:

AE017126

NCBI ID:

ASM792v1

Tax Komarek Ord Fam:

Synechococcales / Prochloraceae

Tax Status Genus:

1, 3, 16S-Type

Tax AlgaeBase Ord Fam:

Synechococcales / Prochloraceae

Tax Status AlgaeBase:

Currently accepted taxonomically

Tax AlgaeBase Holotype:

This is the Type strain of Prochlorococcus marinus S.W.Chisholm, S.L.Frankel, R.Goericke, R.J.Olson, B.Palenik, J.B.Waterbury, L.West-Johnsrud & E.R.Zettler

Tax Bergeys:

I/XI/single cluster

Phylog This Work:

E: 32

Subset Condens Tree:

Yes

Phylog Rdp Classifier:

Family II; 100%; GpIIa; 100%

Phylog Shih:

C1

Phylog Howard Azzeh:

7

Phylog Schirrmeister:

 

Phylog Picocyano:

- / LLII, III

Metadata Shih:

Yes

References:

Chisholm, S. W., et al. (1992). Prochlorococcus marinus nov. gen. nov. sp.: an oxyphototrophic marine prokaryote containing divinyl chlorophyll a and b. Archives of Microbiology 157, 297-300.; Boone, D. R., Castenholz, R. W., & Garrity, G. M., (Eds) (2001). Bergey’s Manual of Systematic Bacteriology, 2nd edn, vol. 1, The Archaea and the deeply branching and phototrophic bacteria. New York, Berlin & Heidelberg: Springer; Dufresne, A., et al. (2003). Genome sequence of the cyanobacterium Prochlorococcus marinus SS120, a nearly minimal oxyphototrophic genome. Proceedings of the National Academy of Sciences 100(17), 10020-10025.; Kettler, G. C. et al. (2007). Patterns and implications of gene gain and loss in the evolution of Prochlorococcus. PLoS Genetics 3, e231.; Scanlan, D. J., et al. (2009). Ecological genomics of marine picocyanobacteria. Microbiology and Molecular Biology Reviews 73(2), 249-299.; Thompson, C. C., et al. (2013). Genomic taxonomy of the genus Prochlorococcus. Microbial Ecology, 66(4), 752-762.; Shih, P. M., et al. (2013). Improving the coverage of the cyanobacterial phylum using diversity-driven genome sequencing. Proceedings of the National Academy of Sciences 110(3), 1053-1058.; Biller, S. J., et al. (2014). Genomes of diverse isolates of the marine cyanobacterium Prochlorococcus. Scientific Data, 1, 140034.; Howard-Azzeh, M., et al. (2014). Phylogenetic analysis and molecular signatures defining a monophyletic clade of heterocystous cyanobacteria and identifying its closest relatives. Photosynthesis Research 122(2), 171-185.

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